Class D (Salmonella ordonez - plasmid pIP173 - IS26 - tetA and tetR genes)
ID SOTETARG standard; DNA; PRO; 2843 BP.
XX
AC X65876;
XX
NI g49073
XX
DT 22-FEB-1993 (Rel. 35, Created)
DT 02-OCT-1993 (Rel. 37, Last updated, Version 11)
XX
DE S.ordonez genes class D tetA and tetR for tetracycline resistance
DE and repressor proteins
XX
KW insertion element IS26; tetA gene; tetR gene;
KW tetracycline repressor protein; tetracycline resistance;
KW transient receptor potential.
XX
OS Salmonella ordonez
OC Eubacteria; Proteobacteria; gamma subdivision; Enterobacteriaceae;
OC Salmonella.
XX
RN [1]
RP 1-2843
RA Bertrand K.P.;
RT ;
RL Submitted (28-APR-1992) to the EMBL/GenBank/DDBJ databases.
RL K.P. Bertrand, Dept of Biochemistry & Biophysics, Washington State
RL University, Pullman, WA 99164-4660, USA
XX
RN [2]
RP 1-2843
RX MEDLINE; 93204906.
RA Allard J.D., Gibson M.L., Vu L.H., Nguyen T.T., Bertrand K.P.;
RT "Nucleotide sequence of class D tetracycline resistance genes from
RT Salmolella ordonez";
RL Mol. Gen. Genet. 237:301-305(1993).
XX
DR SWISS-PROT; P09164; TER4_ECOLI.
DR SWISS-PROT; P33733; TCR4_SALOR.
XX
FH Key Location/Qualifiers
FH
FT source 1..2843
FT /organism="Salmonella ordonez"
FT /strain="BM2000"
FT /clone_lib="pIP173, ColE1-G, pBK2"
FT CDS 1521..2705
FT /gene="tetA"
FT /product="tetracyclin resistance protein"
FT /note="tetracycline efflux pump"
FT /db_xref="PID:g49074"
FT /db_xref="SWISS-PROT:P33733"
FT /translation="MNKPAVIALVITLLDAMGIGLIMPVLPSLLREYLPEADVANHYGI
FT LLALYAVMQVCFAPLLGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRIIS
FT GITGATGAVAASVVADSTAVSERTAWFGRLGAAFGAGLIAGPAIGGLAGDISPHLPFVI
FT AAILNACTFLMVFFIFKPAVQTEEKPADEKQESAGISFITLLKPLALLLFVFFTAQLIG
FT QIPATVWVLFTESRFAWDSAAVGFSLAGLGAMHALFQAVVAGALAKRLSEKTIIFAGFI
FT ADATAFLLMSAITSGWMVYPVLILLAGGGIALPALQGIISAGASAANQGKLQGVLVSLT
FT NLTGVAGPLLFAFIFSQTQQSADGTVWLIGTALYGLLLAICLLIRKPAPVAATC"
FT CDS complement(769..1425)
FT /gene="tetR"
FT /product="tetracycline repressor protein"
FT /db_xref="PID:g49075"
FT /db_xref="SWISS-PROT:P09164"
FT /translation="MARLNRESVIDAALELLNETGIDGLTTRKLAQKLGIEQPTLYWHV
FT KNKRALLDALAVEILARHHDYSLPAAGESWQSFLRNNAMSFRRALLRYRDGAKVHLGTR
FT PDEKQYDTVETQLRFMTENGFSLRDGLYAISAVSHFTLGAVLEQQEHTAALTDRPAAPD
FT ENLPPLLREALQIMDSDDGEQAFLHGLESLIRGFEVQLTALLQIVGGDKLIIPFC"
FT source complement(1..820)
FT /note="IS26"
FT /insertion_seq
FT /organism="Salmonella ordonez"
XX
SQ Sequence 2843 BP; 577 A; 770 C; 798 G; 698 T; 0 other;
GGCACTGTTG CAAAGTTAGC GATGAGGCAG CCTTTTGTCT TATTCAAAGG CCTTACATTT 60
CAAAAACTCT GCTTACCAGG CGCATTTCGC CCAGGGGATC ACCATAATAA AATGCTGAGG 120
CCTGGCCTTT GCGTAGTGCA CGCATCACCT CAATACCTTT GATGGTGGCG TAAGCCGTCT 180
TCATGGATTT AAATCCCAGC GTGGCGCCGA TTATCCGTTT CAGTTTGCCA TGATCGCATT 240
CAATCACGTT GTTCCGGTAC TTAATCTGTC GGTGTTCAAC GTCAGACGGG CACCGGCCTT 300
CGCGTTTGAG CAGAGCAAGC GCGCGACCAT AGGCGGGCGC TTTATCCGTG TTGATGAATC 360
GCGGGATCTG CCACTTCTTC ACGTTGTTGA GGATTTTACC CAGAAACCGG TATGCAGCTT 420
TGCTGTTACG ACGGGAGGAG AGATAAAAAT CGACAGTGCG GCCCCGGCTG TCGACGGCCC 480
GGTACAGATA CGCCCAGCGG CCATTGACCT TCACGTAGGT TTCATCCATG TGCCACGGGC 540
AAAGATCGGA AGGGTTACGC CAGTACCAGC GCAGCCGTTT TTCCATTTCA GGCGCATAAC 600
GCTGAACCCA GCGGTAAATC GTGGAGTGAT CGACATTCAC TCCGCGTTCA GCCAGCATCT 660
CCTGCAGCTC ACGGTAACTG ATGCCGTATT TGCAGTACCA GCGTACGGCC CACAGAATGA 720
TGTCACGCTG AAAATGCCGG CCTTTGAATG GGTTCATGTG CAGCTCCATC AGCAAAAGGG 780
GATGATAAGT TTATCACCAC CGACTATTTG CAACAGTGCC GTAAGCTGCA CCTCAAACCC 840
CCGGATCAGG CTCTCCAGGC CATGCAGAAA GGCCTGCTCA CCATCATCAC TGTCCATAAT 900
CTGCAGCGCT TCCCGCAATA GCGGCGGCAG GTTTTCGTCC GGTGCTGCAG GGCGGTCGGT 960
CAGGGCGGCA GTATGCTCCT GCTGCTCCAG TACGGCACCA AGGGTAAAAT GACTGACCGC 1020
TGAAATCGCA TATAACCCGT CGCGCAGTGA AAAGCCGTTT TCTGTCATAA AGCGTAACTG 1080
GGTTTCCACC GTATCATACT GTTTTTCATC AGGGCGGGTG CCGAGGTGCA CTTTTGCCCC 1140
GTCACGGTAA CGCAGCAGCG CCCGGCGGAA ACTCATTGCA TTATTGCGCA GAAATGACTG 1200
CCAGGATTCC CCCGCCGCAG GCAGTGAATA ATCATGATGA CGCGCCAGGA TCTCCACCGC 1260
CAGCGCATCC AGTAACGCCC GTTTATTTTT CACATGCCAG TAAAGTGTCG GCTGTTCTAT 1320
TCCCAGCTTC TGCGCCAGCT TGCGGGTCGT CAGCCCGTCA ATCCCTGTCT CATTCAGCAG 1380
TTCCAGTGCC GCATCAATAA CCGATTCTCT GTTCAGCCGT GCCATGACCG TCTCCTCCGA 1440
TTTTCAGATT GACACTCTAT CATTGATAGG GATATATTCC AACTCTATCA ATGATAGGGA 1500
ATTAACACAG GATCTGAAAA ATGAATAAAC CCGCTGTCAT CGCGCTGGTG ATTACACTGC 1560
TGGACGCGAT GGGAATTGGT CTGATCATGC CGGTATTACC GTCACTGCTG CGGGAATATC 1620
TCCCGGAAGC GGATGTGGCA AACCATTACG GCATTCTGCT GGCGCTGTAT GCGGTGATGC 1680
AGGTCTGTTT TGCTCCGCTG CTGGGCAGAT GGTCAGATAA GCTGGGGCGC AGACCGGTGC 1740
TGCTGTTATC CCTGGCGGGT GCCGCGTTTG ATTACACACT GCTGGCACTG TCCAATGTGC 1800
TGTGGATGTT GTATCTCGGG CGGATTATCT CCGGGATCAC TGGTGCCACC GGCGCGGTTG 1860
CGGCTTCGGT AGTGGCGGAC AGCACGGCGG TCAGCGAGCG TACCGCCTGG TTCGGCCGTC 1920
TCGGTGCGGC CTTTGGTGCC GGGCTGATTG CCGGGCCGGC TATCGGCGGA CTGGCGGGGG 1980
ATATCTCACC GCATCTGCCG TTTGTCATTG CGGCAATACT GAATGCCTGC ACCTTTCTGA 2040
TGGTCTTTTT TATCTTTAAA CCGGCGGTAC AGACAGAAGA AAAACCGGCG GACGAGAAAC 2100
AAGAAAGCGC AGGTATCAGC TTTATCACAC TGCTTAAACC TCTGGCGCTG TTGCTGTTTG 2160
TCTTTTTTAC CGCGCAGCTT ATCGGGCAGA TCCCGGCCAC TGTCTGGGTA TTGTTTACGG 2220
AGAGCCGCTT TGCCTGGGAC AGCGCGGCGG TCGGTTTTTC ACTGGCGGGA CTCGGGGCGA 2280
TGCATGCACT GTTTCAGGCG GTGGTTGCCG GGGCGCTGGC AAAACGGCTG AGTGAGAAAA 2340
CCATTATTTT CGCCGGATTT ATTGCCGATG CCACCGCGTT TTTACTGATG TCTGCTATCA 2400
CTTCCGGATG GATGGTGTAT CCGGTCCTGA TCCTGCTGGC AGGCGGCGGA ATTGCACTGC 2460
CTGCATTGCA GGGCATTATC TCTGCCGGGG CATCGGCGGC AAATCAGGGA AAACTACAGG 2520
GTGTGCTGGT CAGCCTGACC AATCTGACCG GCGTGGCGGG CCCGCTGCTG TTTGCTTTTA 2580
TTTTCAGTCA GACACAGCAG AGTGCGGACG GTACGGTGTG GCTGATTGGC ACGGCACTGT 2640
ACGGTCTGCT GCTGGCAATC TGTCTGCTGA TCAGAAAACC GGCACCGGTG GCGGCCACCT 2700
GCTGACCGGC GCTATACAGG CAGCGCTGTT GTGCGGTATG GTGGACGGCA TTCGTGCTTA 2760
TCGCCTGCCA TGATAAGCCT CAGACACAGA GGAACCGTTA TGAAATCACG CGCACGAGTC 2820
GCCTTCGGGC CGGGTTTACC CTT 2843
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