Class P (Clostridium perfringens - tetA(P) and tetB(P )genes)
ID CPTETP standard; DNA; PRO; 4375 BP.
XX
AC L20800;
XX
NI g456030
XX
DT 19-FEB-1994 (Rel. 38, Created)
DT 03-AUG-1994 (Rel. 40, Last updated, Version 3)
XX
DE Clostridium perfringens tetracycline resistance protein (tetA(P)
DE and tetB(P)) genes, complete cds's, and three unidentified coding
DE regions.
XX
KW ribosomal modification; ribosomal protection; tetA(P) gene;
KW tetB(P) gene; tetracycline efflux; tetracycline resistance;
KW tetracycline-resistance determinant.
XX
OS Clostridium perfringens
OC Eubacteria; Firmicutes; Low G+C gram-positive bacteria;
OC Clostridiaceae; Clostridium.
XX
RN [1]
RP 1-4375
RX MEDLINE; 94224158.
RA Sloan J., McMurry L.M., Lyras D., Levy S.B., Rood J.I.;
RT "The Clostridium perfringens Tet P determinant comprises two
RT overlapping genes: tetA(P), which mediates active tetracycline
RT efflux, and tetB(P), which is related to the ribosomal protection
RT family of tetracycline-resistance determinants";
RL Mol. Microbiol. 11:403-415(1994).
XX
RN [2]
RP 1-4375
RA Rood J.I.;
RT ;
RL Submitted (01-FEB-1994) to the EMBL/GenBank/DDBJ databases.
RL Julian I. Rood, University, Department of Microbiology, Monash
RL University, Clayton, Victoria, Australia 3168
XX
DR SPTREMBL; Q46302; Q46302.
DR SPTREMBL; Q46303; Q46303.
DR SPTREMBL; Q46304; Q46304.
DR SPTREMBL; Q46305; Q46305.
DR SPTREMBL; Q46306; Q46306.
XX
CC NCBI gi: 456030
XX
FH Key Location/Qualifiers
FH
FT RBS 313..318
FT RBS 973..977
FT RBS 1047..1053
FT /gene="tetA(P)"
FT RBS 2296..2300
FT /gene="tetB(P)"
FT terminator 4333..4373
FT source 1..4375
FT /organism="Clostridium perfringens"
FT /strain="CW92"
FT /sequenced_mol="DNA"
FT CDS <1..309
FT /note="putative; NCBI gi: 456031."
FT /codon_start=1
FT /db_xref="PID:g456031"
FT /db_xref="SPTREMBL:Q46302"
FT /translation="EFLVEPESNTVRQLELSNEEIKLAKSELYRLSMDSNEREQYNMRE
FT KAIYDRISALENAEAKGKIERELELIKESLNQGLEISLISKITGLSEEEILKIKKDI"
FT CDS 326..415
FT /note="putative; NCBI gi: 456032."
FT /codon_start=1
FT /db_xref="PID:g456032"
FT /db_xref="SPTREMBL:Q46303"
FT /translation="MNIIIICAIIGGLMGYFYMNRKLEKKTNN"
FT CDS 987..1070
FT /note="putative; NCBI gi: 456033."
FT /codon_start=1
FT /db_xref="PID:g456033"
FT /db_xref="SPTREMBL:Q46304"
FT /translation="MIYIFKYEDYEKQTNFLRNTRMVMING"
FT CDS 1063..2325
FT /function="efflux of tetracycline"
FT /standard_name="TetA(P)"
FT /gene="tetA(P)"
FT /evidence=EXPERIMENTAL
FT /note="NCBI gi: 456034"
FT /product="tetracycline resistance protein"
FT /codon_start=1
FT /db_xref="PID:g456034"
FT /db_xref="SPTREMBL:Q46305"
FT /translation="MVNKLSAYKTYLLFSAITAMCFSLVATVMMVYHIEIVHLNPLQLI
FT LVGTTLELACFIFEIPTAIVADVYSRKLSIVIGGVLTGVGFILEGSISSFVFVLVAQIV
FT WGLGSTFISGSLEAWIAEEEKNKDLDEIYIKGAQAGQIGAFIGIVLSTVIANFSVRLPI
FT IVSGVLFIILALFLWLYMPENNFKPSAPGDLNTFKKMVYTFKSGLKFVKSKSIIMILLA
FT VTLFYGLSSEGYDRLSNAHFLQDTTLPKLGNLSSVTWFGIFGILGMILSFIVMHFMAKN
FT LKNEDNRKNGKLLLCINILYISSMLIFALTRNFSLMLIAYLATNTFRIINKPIFSAWLN
FT GHIDDNSRATVLSINGQMNSLGQILGGPIIGIIATNISVSIGIVCTSLLVTPVLVLYIV
FT AMIIDKKVDDRVGGIDYEENN"
FT CDS 2309..4267
FT /function="ribosomal modification"
FT /standard_name="TetB(P)"
FT /gene="tetB(P)"
FT /evidence=EXPERIMENTAL
FT /note="NCBI gi: 456035"
FT /codon_start=1
FT /db_xref="PID:g456035"
FT /db_xref="SPTREMBL:Q46306"
FT /translation="MKKIINIGIVAHVDAGKTTITENLLYYSGAIKSVGRVDLGNTQTD
FT SMELERKRGITIKSSTISFNWNNVKVNIIDTPGHVDFISEVERSLNSLDGAILVISGVE
FT GIQSQTRILFDTLKELNIPTIIFVNKLDRIGANFNKVFEEIKKNMSNKVVRLQEVYDVG
FT SKAVYIKKLFDTCIINDDAINVLSDLDEAFLERYIGGIEPDKEEIQEKLSLYAREGSLY
FT PVFCGAAAIGLGIEDLLDGICSYFPFASNDCESDLSGVVFKIERTSKNEKKVYVRLFGG
FT KISVRDKIQVPNKEIAEKVKKINRLENGGVVEAQRIEAGDIGILYGLTSFQVGDVIGIS
FT NDKIKNISIAKPALKTTISAIDKEKNPELFKALTLLAEEDPLLAFAMNDIDKEIYVNLF
FT GEVQMEILSSMLDDLYGIKVEFSNIETIYKETPKGFGASIMHMQEDLNPFWATVGLEIE
FT PAGRGEGLRYISNVSVGSLPKSFQNAIEEAVIKTSKQGLFGWEVTDVKVTLSCGEFFSP
FT ASTPADFRNVTPMVFMEALYKAQTVLLEPLHEFELKIPQNALSKAVWDLETMRATFDNP
FT IVIGDEFSIKGLIPVENSKEYKMKIASYTEGRGMFVTKFYGYKEASAEFSKARKKTTYD
FT PLNKKEYLLHKLNAIRD"
XX
SQ Sequence 4375 BP; 1664 A; 441 C; 824 G; 1446 T; 0 other;
GAATTCTTAG TTGAACCAGA AAGTAATACT GTAAGGCAGT TAGAATTAAG TAATGAAGAA 60
ATTAAACTAG CAAAATCTGA ACTATATAGA CTTAGTATGG ATAGTAATGA AAGAGAACAG 120
TATAATATGA GAGAAAAGGC AATATACGAT AGAATATCTG CCTTAGAAAA TGCTGAAGCT 180
AAAGGAAAGA TAGAAAGAGA ATTAGAGTTA ATAAAGGAGT CTTTAAATCA AGGATTAGAA 240
ATATCCTTAA TTTCTAAAAT AACGGGATTA AGTGAAGAAG AAATATTAAA AATAAAAAAA 300
GATATTTAAT AAAGGAGGAA ATAGTATGAA TATAATTATA ATATGTGCTA TTATAGGTGG 360
ATTAATGGGA TACTTCTATA TGAATAGAAA GCTTGAGAAA AAAACAAATA ATTAGTAATA 420
TTTTTGTGAT AACTAAAAAA GACTCTATAA TTTAGAGTCT TTTTTGATTT TAATTAAATT 480
TGGATAAATA TAAATATAAA AATATTGAAA AAAAATAAAA AAAAATATAT AATGTAGTTA 540
TGCTAAAATA TAAACATGAA AAATATAAAT GTAAAGGTGT TGTAAATATG CGCAAAGAGG 600
TAATTTTTAA TTAAATTAAC TGAATAAGGA TTATTTTTAA AAGTATATGA AAAATCTTGA 660
ATAACTCAAG GTTTATTTGT GGTGGAATCA ATTATTTATA ATATTGATAT TACCATGTTT 720
ATTTGTGTAC TCTAAAAATA ATCAGTATTA TAATGAGCAT GTTACATCTT TATTTGCAGG 780
ATAGGAAAAC CGTGTTCTAA ACACGGTATT TTTATGTCTA TTTTTGCTAT ATATAGATAT 840
GGTATAAGAT TTTAATTTGA ATAGCTTAAT CATAAGTTAT ATAATTAAAG TTCTATATTT 900
TATGTTTATA TTTAGGTTAT ATGATTATGA GGCTGTAAGT GAATTATGTT CATTTACAGC 960
TTTTTTTGTT TAAGGAGATT ATTTTGATGA TTTATATATT TAAATATGAA GATTATGAAA 1020
AACAAACAAA TTTTTTAAGA AATACTAGGA TGGTGATGAT TAATGGTTAA TAAACTTTCA 1080
GCATATAAAA CTTATTTATT ATTTTCAGCT ATTACAGCAA TGTGTTTTTC GTTAGTAGCT 1140
ACAGTTATGA TGGTGTATCA CATTGAAATA GTTCATTTAA ATCCACTTCA GCTTATACTT 1200
GTTGGAACTA CTTTGGAATT AGCATGCTTT ATATTTGAAA TTCCTACAGC TATAGTTGCA 1260
GATGTGTATA GTCGTAAACT ATCTATTGTT ATTGGGGGAG TTTTAACAGG AGTGGGATTT 1320
ATTTTAGAAG GTTCTATTTC TAGTTTTGTT TTCGTACTTG TAGCACAGAT TGTATGGGGA 1380
TTAGGGTCTA CTTTTATCAG TGGCTCGCTT GAAGCTTGGA TTGCGGAAGA AGAGAAGAAT 1440
AAAGATTTAG ATGAAATTTA TATAAAGGGA GCACAAGCAG GGCAGATAGG AGCATTTATT 1500
GGAATAGTAC TAAGCACTGT AATAGCTAAT TTCTCTGTAA GGCTTCCTAT TATAGTTAGT 1560
GGAGTTTTAT TTATAATTCT TGCATTATTT TTATGGTTAT ATATGCCAGA AAATAATTTT 1620
AAACCATCTG CTCCTGGGGA TTTAAATACA TTCAAAAAGA TGGTATATAC ATTTAAATCT 1680
GGTCTTAAAT TTGTAAAAAG TAAATCTATA ATTATGATTT TACTTGCAGT AACTTTATTT 1740
TATGGATTAT CAAGTGAAGG TTATGATAGA CTTTCTAATG CGCATTTTTT ACAAGATACT 1800
ACACTTCCTA AACTTGGAAA CCTTAGTTCA GTGACTTGGT TTGGAATTTT TGGAATTTTA 1860
GGAATGATAT TGAGCTTCAT AGTAATGCAT TTTATGGCAA AGAATCTTAA GAATGAGGAT 1920
AATAGGAAAA ATGGAAAACT ATTATTATGC ATAAATATAC TTTATATATC GTCTATGTTG 1980
ATATTTGCTC TTACAAGAAA CTTTAGTTTA ATGTTAATAG CTTATTTGGC AACAAATACC 2040
TTTAGAATTA TAAATAAACC TATATTCAGT GCGTGGTTAA ATGGGCATAT AGATGATAAT 2100
TCTAGAGCTA CTGTGCTTTC TATAAATGGA CAAATGAATT CCTTAGGTCA AATTTTAGGT 2160
GGACCGATTA TAGGAATCAT AGCTACAAAT ATTTCAGTAA GTATTGGTAT AGTATGTACT 2220
TCGTTATTAG TAACACCGGT ATTAGTGTTA TATATTGTTG CTATGATAAT TGATAAAAAG 2280
GTGGATGATA GAGTTGGAGG TATTGATTAT GAAGAAAATA ATTAATATAG GAATCGTAGC 2340
ACACGTGGAT GCAGGAAAAA CAACTATAAC AGAAAACTTA TTATATTATA GTGGAGCTAT 2400
AAAATCAGTT GGAAGAGTTG ATTTAGGCAA TACACAGACG GATTCTATGG AGCTTGAGCG 2460
TAAGAGAGGA ATTACCATTA AATCGTCAAC CATATCTTTT AATTGGAATA ATGTTAAGGT 2520
GAATATTATT GATACTCCAG GACATGTGGA TTTTATTTCG GAAGTTGAAC GTTCATTAAA 2580
TAGCTTAGAT GGAGCAATAC TAGTTATATC AGGAGTAGAG GGGATTCAGT CACAAACAAG 2640
AATATTATTT GACACATTAA AGGAGTTAAA TATTCCAACA ATAATTTTTG TAAATAAGCT 2700
AGATAGAATT GGGGCAAATT TCAACAAAGT ATTTGAAGAA ATAAAGAAGA ATATGTCCAA 2760
TAAAGTAGTT AGATTACAAG AAGTATATGA TGTAGGAAGC AAAGCTGTTT ATATAAAAAA 2820
ACTATTTGAT ACATGCATAA TAAATGATGA TGCTATTAAT GTTTTATCAG ACTTAGACGA 2880
AGCATTTTTA GAAAGATATA TTGGTGGAAT AGAACCTGAT AAAGAAGAAA TACAAGAAAA 2940
GCTTTCATTA TATGCAAGAG AAGGAAGTCT ATATCCAGTA TTTTGTGGTG CTGCAGCAAT 3000
TGGACTTGGA ATTGAAGATT TATTAGATGG AATTTGTAGT TATTTTCCAT TTGCAAGTAA 3060
TGATTGTGAA AGTGATTTAT CTGGGGTAGT ATTTAAAATC GAAAGAACAA GTAAAAATGA 3120
AAAGAAGGTT TATGTAAGAT TATTTGGAGG AAAAATATCT GTAAGAGATA AAATTCAAGT 3180
ACCTAATAAG GAGATAGCAG AAAAAGTAAA GAAAATTAAT AGGTTAGAAA ATGGGGGAGT 3240
TGTTGAAGCA CAGAGGATAG AAGCAGGGGA TATAGGTATT TTATATGGAC TTACAAGTTT 3300
CCAAGTGGGA GATGTTATTG GAATTTCAAA TGATAAAATT AAAAATATAT CTATAGCTAA 3360
ACCAGCATTA AAAACAACAA TTTCTGCAAT TGATAAAGAA AAAAATCCAG AGCTATTTAA 3420
AGCATTAACA TTACTTGCAG AGGAAGATCC ACTACTCGCC TTCGCGATGA ATGACATAGA 3480
TAAAGAAATT TATGTCAACT TATTCGGTGA AGTTCAAATG GAAATACTAA GTTCCATGTT 3540
AGATGATTTA TATGGAATAA AAGTAGAGTT TTCGAATATT GAGACTATCT ATAAGGAAAC 3600
ACCTAAAGGT TTTGGAGCGT CAATAATGCA TATGCAGGAA GACTTAAATC CATTTTGGGC 3660
GACAGTAGGC TTAGAAATAG AACCAGCAGG GAGAGGCGAA GGTCTTAGGT ATATTTCTAA 3720
TGTTTCAGTA GGGTCATTGC CAAAATCTTT TCAAAATGCA ATTGAAGAAG CAGTTATTAA 3780
GACAAGTAAA CAAGGATTAT TTGGATGGGA GGTTACAGAT GTAAAAGTCA CTCTTAGCTG 3840
TGGTGAATTT TTTAGTCCAG CCAGCACTCC AGCAGATTTT AGAAATGTGA CACCTATGGT 3900
ATTCATGGAA GCATTATATA AAGCACAAAC TGTTTTATTA GAGCCATTAC ATGAGTTTGA 3960
GTTAAAGATT CCTCAAAATG CTTTAAGCAA AGCGGTATGG GATTTAGAAA CTATGAGGGC 4020
AACCTTTGAT AATCCTATTG TTATAGGGGA TGAATTCTCA ATAAAGGGAT TAATTCCAGT 4080
AGAAAATTCA AAAGAATATA AAATGAAAAT AGCTTCATAT ACAGAAGGTA GAGGAATGTT 4140
TGTGACAAAA TTTTATGGGT ATAAGGAAGC TTCAGCTGAA TTTTCAAAAG CACGCAAAAA 4200
AACAACGTAT GATCCATTGA ATAAAAAAGA GTATTTGCTT CATAAACTAA ACGCAATTAG 4260
AGATTAAATT TAAATAGATA AGTTAAATTT TTATATGTAG GATTTAAATA TAAGACATTC 4320
AAAGCCTAAA AGTAAAGGAA GGGTCGTCTG AAGAAGATGA AGACCCTTCC TTTTT 4375
//