Class Q (Bacteroides fragilis - tet(Q) gene)
ID BFTETAQ2 standard; DNA; PRO; 2433 BP.
XX
AC Z21523;
XX
NI g394758
XX
DT 20-JUL-1993 (Rel. 36, Created)
DT 04-JAN-1994 (Rel. 38, Last updated, Version 9)
XX
DE B.fragilis tetA(Q)2 gene
XX
KW tetA(Q) gene.
XX
OS Bacteroides fragilis
OC Eubacteria; Cytophagales; Bacteroidaceae; Bacteroides.
XX
RN [1]
RP 1-2433
RX MEDLINE; 94058212.
RA Lepine G., Lacroix J.M., Progulske-Fox A., Walker C.B.;
RT "Sequencing of a Tet(Q) Gene Isolated from Bacteroides fragilis
RT 1126";
RL Antimicrob. Agents Chemother. 37:2037-2041(1993).
XX
RN [2]
RP 1-2433
RA Lacroix J.;
RT ;
RL Submitted (01-FEB-1993) to the EMBL/GenBank/DDBJ databases.
RL Jean-Michel Lacroix, Oral Biology, University of Florida, 1600,
RL S.W. Archer Road, Gainesville, Florida, 32610-0424, USA
XX
DR SWISS-PROT; Q08425; TETQ_BACFR.
XX
FH Key Location/Qualifiers
FH
FT source 1..2433
FT /organism="Bacteroides fragilis"
FT /strain="1126"
FT /clone_lib="genomic library in pPH6"
FT /clone="clone pBSK1.2-5"
FT /isolate="1126, tetracycline resistant"
FT CDS 314..2287
FT /product="TetA(Q)2 protein"
FT /note="For putative start codon as GTG"
FT /gene="TetA(Q)2"
FT /evidence=EXPERIMENTAL
FT /db_xref="PID:g580768"
FT /db_xref="SWISS-PROT:Q08425"
FT /translation="MRFDNASIVVYYCLIQMNIINLGILAHIDAGKTSVTENLLFASGA
FT TEKCGRVDNGDTITDSMDIEKRRGITVRASTTSIIWNGVKCNIIDTPGHMDFIAEVERT
FT FKMLDGAVLILSAKEGIQAQTKLLFNTLQKLQIPTIIFINKIDRDGVNLERLYLDIKTN
FT LSQDVLFMQTVVDGLVYPICSQTYIKEEYKEFVCNHDDNILERYLADSEISPADYWNTI
FT IDLVAKAKVYPVLHGSAMFNIGINELLDAISSFILPPESVSNRLSAYLYKIEHDPKGHK
FT RSFLKIIDGSLRLRDIVRINDSEKFIKIKNLKTIYQGREINVDEVGANDIAIVEDMEDF
FT RIGDYLGTKPCLIQGLSHQHPALKSSVRPDRSEERSKVISALNTLWIEDPSLSFSINSY
FT SDELEISLYGLTQKEIIQTLLEERFSVKVHFDEIKTIYKERPVKKVNKIIQIEVPPNPY
FT WATIGLTLEPLPLGTGLQIESDISYGYLNHSFQNAVFEGIRMSCQSGLHGWEVTDLKVT
FT FTQAEYYSPVSTPADFRQLTPYVFRLALQQSGVDILEPMLYFELQIPQAASSKAITDLQ
FT KMMSEIEDISCNNEWCHIKGKVPLNTSKDYASEVSSYTKGLGVFMVKPCGYQITKGDYS
FT DNIRMNEKDKLLFMFQKSMSSK"
FT -10_signal 258..263
FT -35_signal 225..230
FT RBS 299..304
FT CDS 362..2287
FT /product="TetA(Q)2 protein"
FT /note="For alternative putative start codon as ATG"
FT /gene="TetA(Q)2"
FT /evidence=EXPERIMENTAL
FT /db_xref="PID:g394760"
FT /db_xref="SWISS-PROT:Q08425"
FT /translation="MNIINLGILAHIDAGKTSVTENLLFASGATEKCGRVDNGDTITDS
FT MDIEKRRGITVRASTTSIIWNGVKCNIIDTPGHMDFIAEVERTFKMLDGAVLILSAKEG
FT IQAQTKLLFNTLQKLQIPTIIFINKIDRDGVNLERLYLDIKTNLSQDVLFMQTVVDGLV
FT YPICSQTYIKEEYKEFVCNHDDNILERYLADSEISPADYWNTIIDLVAKAKVYPVLHGS
FT AMFNIGINELLDAISSFILPPESVSNRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRDI
FT VRINDSEKFIKIKNLKTIYQGREINVDEVGANDIAIVEDMEDFRIGDYLGTKPCLIQGL
FT SHQHPALKSSVRPDRSEERSKVISALNTLWIEDPSLSFSINSYSDELEISLYGLTQKEI
FT IQTLLEERFSVKVHFDEIKTIYKERPVKKVNKIIQIEVPPNPYWATIGLTLEPLPLGTG
FT LQIESDISYGYLNHSFQNAVFEGIRMSCQSGLHGWEVTDLKVTFTQAEYYSPVSTPADF
FT RQLTPYVFRLALQQSGVDILEPMLYFELQIPQAASSKAITDLQKMMSEIEDISCNNEWC
FT HIKGKVPLNTSKDYASEVSSYTKGLGVFMVKPCGYQITKGDYSDNIRMNEKDKLLFMFQ
FT KSMSSK"
FT -10_signal 342..347
FT -35_signal 321..326
XX
SQ Sequence 2433 BP; 799 A; 439 C; 495 G; 700 T; 0 other;
CCCGGGGGGA AATACTCAAA TGCCAAACTA AAGAAGATAT TGGCCAAAAT AAACGTTATA 60
CCGAGAGAGA AACTTGATTT TTTTCAACTT CCTAAAACGT TGTTGTTCAA ACATTTCTAC 120
TTATTTGTAC TTACCAGTTG AACCTACGCT TCCCTAATAA AATGTCTATG GTAAAAAGTT 180
AAAAAATCCT CCCACTTTTG TTAGATATAT TTTTTTGTGT AATTTTGTAA TCGTTATGCG 240
GCAGTAATAA TATACATATT AATACGAGTT AGTAATCCTG TAGTTCTCAC ATGCTACGAG 300
GAGGTATTAA AAGGTGCGTT TCGACAATGC ATCTATTGTA GTATATTATT GCTTAATCCA 360
AATGAATATT ATAAATTTAG GAATTCTTGC TCACATTGAT GCAGGAAAAA CTTCCGTAAC 420
CGAGAATCTG CTGTTTGCCA GTGGAGCAAC GGAAAAGTGC GGCCGTGTGG ATAATGGTGA 480
CACCATAACA GACTCTATGG ATATAGAGAA ACGTAGAGGA ATTACTGTTC GGGCTTCTAC 540
GACATCTATT ATCTGGAATG GAGTGAAATG CAATATCATT GACACTCCGG GACACATGGA 600
TTTTATTGCG GAAGTGGAGC GGACATTCAA AATGCTTGAT GGAGCAGTCC TCATCTTATC 660
CGCAAAGGAA GGCATACAAG CGCAAACAAA GTTGCTGTTC AATACTTTAC AAAAACTGCA 720
AATCCCGACA ATTATATTTA TCAATAAAAT TGACCGTGAC GGTGTGAATT TAGAGCGTTT 780
GTATCTGGAT ATAAAAACAA ATCTGTCTCA AGATGTCCTG TTTATGCAAA CTGTTGTCGA 840
TGGATTGGTT TATCCGATTT GCTCCCAAAC ATATATAAAG GAAGAATACA AAGAATTTGT 900
ATGCAACCAT GACGACAATA TATTAGAACG ATATTTGGCG GATAGCGAAA TTTCACCGGC 960
TGATTATTGG AATACGATAA TCGATCTTGT GGCAAAAGCC AAAGTCTATC CGGTACTACA 1020
TGGATCAGCA ATGTTCAATA TCGGTATCAA TGAGTTGTTG GACGCCATCT CTTCTTTTAT 1080
ACTTCCTCCA GAATCAGTCT CAAACAGACT TTCAGCTTAT CTCTATAAGA TAGAGCATGA 1140
CCCCAAAGGA CATAAAAGAA GTTTTCTAAA AATAATTGAC GGAAGTCTGA GACTTCGAGA 1200
CATTGTAAGA ATCAACGATT CGGAAAAATT CATCAAGATT AAAAATCTAA AGACTATTTA 1260
TCAGGGCAGA GAGATAAATG TTGATGAAGT GGGGGCCAAT GATATCGCGA TTGTAGAAGA 1320
TATGGAAGAT TTTCGAATCG GAGATTATTT AGGTACTAAA CCTTGTTTGA TTCAAGGGTT 1380
ATCTCATCAG CATCCCGCTC TCAAATCCTC CGTCCGGCCA GACAGGTCCG AAGAGAGAAG 1440
CAAGGTGATA TCCGCTCTGA ATACATTGTG GATTGAAGAC CCGTCTTTGT CCTTTTCCAT 1500
AAACTCATAT AGTGATGAAT TGGAAATCTC GTTATATGGT TTGACACAAA AGGAAATCAT 1560
ACAGACATTG CTGGAAGAAC GATTTTCCGT AAAGGTCCAT TTTGATGAGA TCAAGACTAT 1620
CTACAAAGAA CGACCTGTAA AAAAGGTCAA TAAGATTATT CAGATCGAAG TGCCACCCAA 1680
CCCTTACTGG GCCACAATAG GGCTGACGCT TGAACCCTTG CCGTTAGGGA CAGGGTTGCA 1740
AATCGAAAGT GACATCTCCT ATGGTTATCT GAACCATTCT TTTCAAAATG CCGTTTTTGA 1800
AGGGATTCGT ATGTCTTGCC AATCTGGTTT ACATGGATGG GAAGTGACTG ATCTGAAAGT 1860
AACTTTTACT CAAGCCGAGT ATTATAGCCC GGTAAGTACA CCTGCTGATT TCAGACAGCT 1920
GACCCCTTAT GTCTTCAGGC TGGCCTTGCA ACAGTCAGGT GTGGACATTC TCGAACCGAT 1980
GCTCTATTTT GAGTTGCAGA TACCCCAAGC GGCAAGTTCC AAAGCTATTA CAGATTTGCA 2040
AAAAATGATG TCTGAGATTG AAGACATCAG TTGCAATAAT GAGTGGTGTC ATATTAAAGG 2100
GAAAGTTCCA TTAAATACAA GTAAAGACTA CGCCTCAGAA GTAAGTTCAT ACACTAAGGG 2160
CTTAGGCGTT TTTATGGTCA AGCCATGCGG GTATCAAATA ACAAAAGGCG ATTATTCTGA 2220
TAATATCCGC ATGAACGAAA AAGATAAACT TTTATTCATG TTCCAAAAAT CAATGTCATC 2280
AAAATAATGG AGCGGTCAGG AAATTTCTAT AAGGCAATAC AGTTGGGATA TATACTTATC 2340
TCCATTCTTA TCGGATGTAT GGCATATAAT AGCCTCTATG AATGGCAGGA GATAGAAGCA 2400
TTAGAACTTG GCAATAAAAA AATAGACGAG CTC 2433
//