Class Q (Prevotella ruminicola - plasmid pRRI4 - tet(Q) gene)
ID PRTETQ standard; DNA; PRO; 3303 BP.
XX
AC L33696;
XX
NI g499664
XX
DT 06-MAR-1995 (Rel. 42, Created)
DT 06-MAR-1995 (Rel. 42, Last updated, Version 1)
XX
DE Prevotella ruminicola (clone pRTC1) tetQ gene and rteA pseudogene,
DE complete cds's.
XX
KW pseudogene; rteA gene; tetQ gene.
XX
OS Prevotella ruminicola
OC Eubacteria; Cytophagales; Bacteroidaceae; Prevotella.
XX
RN [1]
RP 1-3303
RX MEDLINE; 95031033.
RA Nikolich M.P., Hong G., Shoemaker N.B., Salyers A.A.;
RT "Evidence for natural horizontal transfer of tetQ between bacteria
RT that normally colonize humans and bacteria that normally colonize
RT livestock";
RL Appl. Environ. Microbiol. 60:3255-3260(1994).
XX
DR SPTREMBL; Q52360; Q52360.
XX
CC NCBI gi: 499664
XX
FH Key Location/Qualifiers
FH
FT source 1..3303
FT /organism="Prevotella ruminicola"
FT /strain="223"
FT /sequenced_mol="DNA"
FT CDS 825..2750
FT /gene="tetQ"
FT /note="NCBI gi: 499665"
FT /codon_start=1
FT /db_xref="PID:g499665"
FT /db_xref="SPTREMBL:Q52360"
FT /translation="MNIINLGILAHIDAGKTSVTENLLFASGATEKCGRVDNGDTITDS
FT MDIEKRRGITVRASTTSIIWNGVKCNIIDTPGHMDFIAEVERTFKMLDGAVLILSAKEG
FT IQAQTKLLFSTLQKLQIPTIIFINKIDRAGVNLERLYMDIKTNLSQDVLFMQTVVDGSV
FT YPVCSQTYIKEEYKEFVCNHDDDILERYLADSEISPADYWNTIIALVAKAKVYPVLHGS
FT AMFNIGINELLDAITSFILPPASVSNRLSAYLYKIEHDPKGHKRSFLKIIDGSLRLRDV
FT VRINDSEKFIKIKNLKTIYQGREINVDEVGANDIAIVEDIEDFRIGDYLGAKPCLIQGL
FT SHQHPALKCSVRPNKPEERSKVISALNTLWIEDPSLSFSINSYSDELEISLYGLTQKEI
FT IQTLLEERFSVKVHFDEIKTIYKERPIKKVNKIIQIEVPPNPYWATIGLTLEPLPLGAG
FT LQIESDISYGYLNHSFQNAVFEGIRMSCQSGLHGWEVTDLKVTFTQAEYYSPVSTPADF
FT RQLTPYVFRLALQQSGVDILEPMLCFELQIPQVASSKAITDLQKMMSEIEDISCNNEWC
FT HIKGKVPLNTSKDYASEVSSYTKGLGIFMVKPCGYQITKDGYSDNIRMNEKDKLLFMFQ
FT KSMSLK"
FT CDS 2750..3100
FT /gene="rteA"
FT /note="truncated"
FT /pseudo
FT /codon_start=1
FT /db_xref="PID:e103279"
FT /translation="MERSGNFYKAIRLGYILISILIGCMAYNSLYEWQEIEALELGNKK
FT IDELRKEINNINIQMIKFSLLGETMTRISASSIIVLLPHSATEQLVFLSRYQCHEACKS
FT RLLRSKRKIGRN"
XX
SQ Sequence 3303 BP; 1085 A; 608 C; 664 G; 946 T; 0 other;
CCGCTCAAGC CGCCCGCAAG ATGTCGAGCC CCAGGCACAA AAATCACCGC CGCAGATACG 60
CAGTCCGGCG GAATAGTATT CGTTGCCAAC CATGTCATAA TCGGGCTCCG GAACGTATGC 120
CAAGGAGTAC CCGGTCCAAA GGATTGAAAA TATAACCTAA GGAATTTTAT CTGAAGTATT 180
AATAAGGGCT ATCCCAAAAG GTGTAAAAGC AAATTTTATC CTTTCTGCAA GTATCTATAG 240
GATGGCAACT GCATTTTTTT CTTTTTGGGC AGCCCCTTAT TAAAATTTAT TCTTATTTTA 300
GGTTATATAC ATTCATGTCC ATTTATGTAA AAAATTCCTG CTGACCTTGT TTATGTCTTG 360
TCAGTCACCA TTTGCAAAAC CATATTTGAC CCTCAAAGAG GCTGAATTTG ATAAGTAACT 420
TGCTACATAC TCATAATAAG GAGCTAAATA GAACACGAAT GGGAAATACA CAAATGCTAA 480
ACTAAAGAAG ATATTGGCCA AAATAAACGC TATACCGAGA GAGAAACTTG ATTTTTCAAC 540
TTCCTAAAAC GGTGTTGTTC AAACATTTCT ACTTATTTGT ACTTGCCAGT TGAACCTACG 600
CTTCCCTAAT AAAATGTCTA TGGTAAAAAG TTAAAAAATC CTTAAAAAAT CCTCCCACTT 660
TTGTTAGATA TATTTTTTTG TGTAATTTTG TAATCGTTAT GCGGCAGTAA TAATATACAT 720
ATTAATACGA GTTAGTAATC CTGTAGTTCT CATATGCTAC GAGGAGGTAT TAAAAGGTGC 780
GTTTCGACAA TGCATCTACT GTAGTATATT ATTGCTTAAT CCAAATGAAT ATTATAAATT 840
TAGGAATTCT TGCTCACATT GATGCAGGAA AAACTTCCGT AACCGAGAAT CTGCTGTTTG 900
CCAGTGGAGC AACGGAAAAG TGCGGCCGTG TGGATAATGG TGACACCATA ACGGACTCTA 960
TGGATATAGA GAAACGTAGA GGAATTACTG TCCGGGCTTC TACGACATCT ATTATCTGGA 1020
ATGGAGTGAA ATGCAATATC ATTGACACTC CGGGACACAT GGATTTTATT GCGGAAGTGG 1080
AGCGGACATT CAAAATGCTT GATGGAGCAG TCCTCATCTT ATCCGCAAAG GAAGGCATAC 1140
AAGCGCAGAC AAAGTTGCTG TTCAGTACTT TACAAAAGCT GCAAATCCCG ACAATTATAT 1200
TTATCAATAA GATTGACCGT GCCGGTGTGA ATTTGGAGCG TTTGTATATG GATATAAAAA 1260
CAAATCTGTC GCAAGATGTC CTGTTTATGC AAACTGTTGT CGATGGATCG GTTTATCCGG 1320
TTTGCTCCCA AACATATATA AAGGAAGAAT ACAAAGAATT TGTATGCAAC CATGACGACG 1380
ATATATTAGA ACGATATTTG GCGGATAGCG AAATTTCACC GGCTGATTAT TGGAATACGA 1440
TAATCGCTCT TGTGGCAAAA GCCAAAGTCT ATCCGGTGCT ACATGGATCA GCAATGTTCA 1500
ATATCGGTAT CAATGAGTTG TTGGACGCCA TTACTTCTTT TATACTTCCT CCGGCATCAG 1560
TCTCAAACAG ACTTTCAGCT TATCTCTATA AGATAGAGCA TGACCCCAAA GGGCATAAAA 1620
GAAGTTTTCT TAAAATAATT GACGGAAGTC TGAGACTTCG AGACGTTGTA AGAATCAACG 1680
ATTCGGAAAA ATTCATCAAG ATTAAAAATC TAAAGACTAT TTATCAGGGC AGAGAGATAA 1740
ATGTTGATGA AGTGGGTGCC AATGATATCG CGATTGTAGA AGATATAGAA GATTTTCGAA 1800
TCGGAGATTA TTTAGGTGCT AAACCTTGTT TGATTCAAGG ATTATCTCAT CAGCATCCCG 1860
CTCTCAAATG CTCCGTCCGG CCAAATAAGC CCGAAGAGAG AAGCAAGGTG ATATCCGCTC 1920
TGAATACATT GTGGATTGAA GACCCGTCTT TGTCCTTTTC CATAAACTCA TATAGTGATG 1980
AATTGGAAAT CTCGTTATAT GGTTTGACCC AAAAGGAAAT CATACAGACA TTGCTGGAAG 2040
AACGATTTTC CGTAAAGGTC CATTTTGATG AGATCAAGAC TATCTACAAA GAACGACCTA 2100
TAAAAAAGGT CAATAAGATT ATTCAGATCG AAGTACCACC CAACCCTTAC TGGGCCACAA 2160
TAGGGCTGAC TCTTGAACCC TTACCGTTAG GGGCAGGGTT GCAAATCGAA AGTGACATCT 2220
CCTATGGTTA TCTGAACCAT TCTTTTCAAA ATGCCGTTTT TGAAGGGATT CGTATGTCTT 2280
GCCAATCTGG TTTACATGGA TGGGAAGTGA CAGATCTGAA AGTAACTTTT ACTCAAGCCG 2340
AGTATTATAG CCCGGTAAGT ACACCTGCTG ATTTCAGACA GCTGACCCCT TATGTCTTCA 2400
GGCTGGCTTT GCAACAGTCA GGTGTGGACA TTCTCGAACC GATGCTCTGT TTTGAGTTGC 2460
AGATACCCCA AGTAGCGAGT TCCAAAGCTA TTACAGATTT GCAAAAAATG ATGTCTGAGA 2520
TTGAAGACAT CAGTTGTAAT AATGAGTGGT GTCATATTAA AGGGAAAGTT CCATTAAATA 2580
CAAGTAAAGA CTATGCCTCA GAAGTAAGTT CGTACACTAA GGGCTTAGGC ATTTTTATGG 2640
TTAAGCCATG TGGGTATCAA ATAACAAAAG ACGGTTATTC TGATAATATC CGCATGAACG 2700
AAAAAGATAA ACTTTTATTC ATGTTCCAAA AATCAATGTC ATTAAAATAA TGGAGCGGTC 2760
AGGAAATTTC TATAAGGCAA TACGGTTGGG ATATATACTT ATCTCCATTC TTATCGGATG 2820
TATGGCATAT AATAGCCTCT ATGAATGGCA GGAGATAGAA GCATTAGAAC TTGGCAATAA 2880
AAAAATAGAC GAGCTCCGAA AAGAAATAAA CAATATCAAT ATTCAAATGA TAAAATTTTC 2940
TCTATTGGGT GAAACAATGA CAAGAATTTC CGCATCATCA ATAATAGTAT TGCTGCCCCA 3000
TTCAGCTACA GAGCAATTAG TGTTCCTTTC ACGCTACCAA TGTCATGAAG CATGTAAAAG 3060
TCGGCTTTTA CGATCAAAAC GGAAAATTGG TAGAAACTGA TGATACAGAA ATGATTGTGC 3120
CAAATGGACA AGAAACCTTT GCATCCGTTC CCGGGAAGAA AGTCGCAAAG AAAGTCATAA 3180
AATTCTTAGA GAGTGGTAAA CCTGGCTACG TCAGAATAGT TGCGCCTCTT TATGGTTCTA 3240
ATGCTTCATT CGACATTAAG ATTCCATGCA GAAAATAGAA AAAGCATGCC TACACGTAGG 3300
ATG 3303
//